Auxiliary Drainage Systems on Sailboats

About drainage systems on sailboats, a practical guide to non-bilge drainage design, function, and maintenance.  On a sailboat, not all water ends up in the bilge. In fact, many onboard systems rely on auxiliary (or ancillary) drainage systems to safely remove water before it becomes a problem. These drains are often overlooked because they operate quietly and passively, yet failures can cause leaks, odors, corrosion, or even flooding in confined spaces.

Auxiliary drainage systems on sailboats include all non-bilge drains that manage water from lockers, compartments, equipment, and condensation sources. Unlike bilge systems, which are reactive and pump-based, auxiliary drains are usually gravity-fed, lightly loaded, and intended to prevent water accumulation in the first place. This page provides a systems-level overview of auxiliary drainage on sailboats, how these drains work, where they are used, common failure modes, and best-practice design principles for cruising and liveaboard vessels.

Safety & Design Disclaimer

Drainage system design varies by vessel and operating environment. Modifications should consider vessel stability, flooding risk, and local regulations and ABYC or other body. When in doubt, consult a qualified marine professional. 

What Are Auxiliary Drainage Systems on a Sailboat?

Auxiliary drainage systems refer to any drain that:

  • Is not part of the bilge pump system
  • Handles incidental or low-volume water
  • Relies primarily on gravity rather than pumps
  • Protects specific compartments or equipment

These systems manage water that originates from normal operation rather than flooding. Their purpose is preventative, keeping water from entering living spaces, machinery areas, or structural voids.

Examples include:

  • Anchor locker drains
  • Cockpit locker drains
  • Gas Locker drains
  • Deck Locker drains
  • Refrigeration compartment drains
  • Air-conditioning condensate drains
  • Icebox meltwater drains
  • Mast compression post drains (where fitted)

Why Auxiliary Drainage Systems Matter

Although auxiliary drains handle relatively small volumes of water, failures can have disproportionate consequences. A blocked locker drain can flood a cockpit locker, saturate core material, or leak into the interior. A poorly routed condensate drain can drip continuously into a bilge or cause hidden mold growth.  For cruising sailboats, especially those operating offshore or in tropical climates, proper auxiliary drainage:

  • Reduces moisture accumulation, which can often stagnate
  • Prevents hidden corrosion and rot in metal and timber parts
  • Improves onboard hygiene, with no place for bacterial growth
  • Minimizes unpleasant odors
  • Protects structural components from corrosion

Because these drains are often out of sight, they require thoughtful design and periodic inspection.

Anchor Locker and Chain Locker Drains

Anchor lockers and the anchor well drain are exposed to seawater, rain, and mud. Drainage prevents standing water from soaking chain, corroding fittings, or leaking aft.  Best practice includes:

  • Large-diameter drains
  • Direct overboard discharge
  • No valves or restrictions
  • Easy access for inspection

Anchor locker drains must never connect to the bilge, although many boats like mine have this system.

Cockpit and Deck Locker Drains

Cockpit lockers frequently collect rainwater, spray, and wet gear. The actual cokpit also has very important boat cockpit drains. These lockers are often located above the waterline and should drain directly overboard via gravity. Common issues include:

  • Small drain fittings clogging with debris
  • Long hose runs sagging and trapping water
  • Hose connections loosening under vibration

Refrigeration and Icebox Drains

Refrigeration compartments and iceboxes produce meltwater and condensation. Drains are typically small-diameter hoses routed to:

  • A dedicated sump
  • A galley sink drain
  • A direct overboard fitting
  • A bilge well

Poor design can allow warm air ingress, odors, or reverse flow into the fridge. Some like mine have a small valve installed

Air-Conditioning Condensate Drains

On sailboats fitted with air conditioning, condensate drains remove water produced by evaporator units. Although volumes are relatively small, continuous dripping can cause damage if misrouted. Key considerations include:

  • Continuous downward slope
  • Anti-siphon protection where required
  • Secure hose routing away from electrical equipment

Drainage Systems on Sailboats - Miscellaneous and Forgotten Drains

Other auxiliary drains commonly found on sailboats include:

  • Deck locker drains
  • Boat Scuppers
  • Wet-locker drains
  • Shower tray bypass drains
  • Mast or deck hardware drains
  • Window frame drainage channels

These are often added incrementally during a boat’s life and may lack documentation.

Design Principles for Auxiliary Drainage Systems

Gravity First.  Auxiliary drains should rely on gravity wherever possible. Pumps add complexity, noise, and failure points.

Above-Waterline Discharge.  Whenever practical, auxiliary drains should exit above the static waterline to reduce flooding risk and simplify design.

Avoid Valves and Seacocks. Valves are rarely appropriate for auxiliary drains. If a valve is necessary, its failure consequences must be carefully considered.

Hose Routing and Support. Hoses must:

  • Run continuously downhill
  • Be supported to prevent sagging
  • Avoid sharp bends
  • Be secured against vibration
  • Siphoning Prevention

Drains routed near or below the waterline may require vented loops to prevent backflow.

Common Problems and Failure Modes

Auxiliary drainage failures usually develop slowly and unnoticed.  Typical issues include:

  • Blockages from debris, hair, or food particles
  • Hose collapse or cracking
  • Loose hose clamps
  • Odor migration
  • Hidden leaks into cabinetry or liners

Because these systems are lightly loaded, problems may only appear during heavy rain or prolonged use.

Drainage Systems on Sailboats - Inspection and Maintenance Best Practices

Regular inspection is simple and effective:

  • Flush drains periodically with fresh water
  • Check hose connections annually
  • Inspect through-hulls for blockage
  • Confirm drains remain clear after heavy weather
  • Ensure no drain discharges into the bilge unintentionally

On liveaboard sailboats, auxiliary drains should be inspected as part of routine maintenance schedules.

How Auxiliary Drains Differ from Bilge Systems

Bilge systems are emergency and damage-control systems. Auxiliary drains are preventative and hygiene-focused systems. Confusing the two leads to poor design decisions, such as routing locker drains into the bilge, introducing dirt, salt, and organic matter that accelerates corrosion and odors. A well-designed sailboat keeps auxiliary drainage separate from bilge management wherever possible. If you have an older boat with legacy issues of poor design, it is worth reviewing the system and improving the drainage systems on sailboats.